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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015844824.1_cds_XP_016509119.1_22075
CDS Infomation

[gene=LOC107826631] [db_xref=GeneID:107826631] [protein=2-oxoglutarate-dependent dioxygenase AOP3-like] [protein_id=XP_016509119.1] [location=join(636..1015,1651..1975,3119..3361)] [gbkey=CDS]
Sequence

ATGAGTCATCAAACACCCCTAAGACTTCCTCTCTTGACCCTATCAAATCACTACTTGAAA
CCTAATACTTCGAATTGGTTCTCAGCTTGTGATGAAGTCCGCCGTGCACTGGAAGAGTGC
GGTTGTTTTCTGGCGGTTTACGACTCGGTTTCGCCGGAGCTAAATAGTGATATATTTCAA
GCAGTGGAAGAATTGTTTGATCTTCCCACAGAAACCAAACTTTATAACACTTCTGAAAAA
CCCTTCTATGGCTACTATGGAAAAATCCCTGATTTCCCTCTTCAAGAAAGCCTAGGGATT
AATATTGGAGATGCAATAACTGCTGAAGGAGTTCAAAATTTTACTAACCTCATGTGGCCT
TCAGGAAATGACCACTTTAGTGAAATTATTCATGACTATGCAAACATAGTAGCTGGTTTG
GAGAAGATGGTGAAAAAGATGGTTTTTGAGAGCTATGGAGTAGAAAAATGCTATGATTCT
CTAGAGGAATCAACAACTTATCTCCTTCGATTAATAAAGTATAGGACACCAAAATTGGAT
GAATCAAATGTTGGGTCACAAGTTCACACTGATAAAACTTTTCTGAGCATACTTCACCAG
AACCAAGTTAATGGTTTGGAAATTAAGACCAAAGATGGTGAATGGATGGCTGTTGATATG
ACTCCTGCTAATTCTTTTCTTGTTATGGTAGGGGAAGCATTTTCGGCATGGAGCAACAAC
AGATTGCATTGTCCTGTACATAGGGTGATTGTGAAGGAGAACAAACCAAGGTACACAATA
GCACATTTCTCATACATTAATGGGATGATACAAACCCCAGAAGAGCTTGTTGATGAGAAA
CACCCTATCAAGTTTCAACCATTTGATAACTTTGAATTGCTGGATTTCTTTGCCAAACAT
ATTAACGACCAAATGGAATACACTGTCAGAGCCTTCTGTGGGGTTTGA

Peptide Sequence

PEP ID

XP_016509119.1
PEP Infomation

PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP3-like [Nicotiana tabacum]
Sequence

MSHQTPLRLPLLTLSNHYLKPNTSNWFSACDEVRRALEECGCFLAVYDSVSPELNSDIFQ
AVEELFDLPTETKLYNTSEKPFYGYYGKIPDFPLQESLGINIGDAITAEGVQNFTNLMWP
SGNDHFSEIIHDYANIVAGLEKMVKKMVFESYGVEKCYDSLEESTTYLLRLIKYRTPKLD
ESNVGSQVHTDKTFLSILHQNQVNGLEIKTKDGEWMAVDMTPANSFLVMVGEAFSAWSNN
RLHCPVHRVIVKENKPRYTIAHFSYINGMIQTPEELVDEKHPIKFQPFDNFELLDFFAKH
INDQMEYTVRAFCGV

Transcript Sequence

Gene sequence data has not been registered.